| 1. |  | AC Sparta Praha | 809 | 499 | 173 | 137 | 1494 | 649 | +845 | 1652 |
| 2. |  | SK Slavia Praha | 809 | 421 | 213 | 175 | 1321 | 753 | +568 | 1460 |
| 3. |  | FC Slovan Liberec | 808 | 353 | 224 | 231 | 1092 | 865 | +227 | 1272 |
| 4. |  | FK Jablonec | 779 | 308 | 219 | 252 | 1062 | 898 | +164 | 1143 |
| 5. |  | FC Viktoria Plzeň | 689 | 323 | 167 | 199 | 1018 | 767 | +251 | 1124 |
| 6. |  | SK Sigma Olomouc | 746 | 289 | 207 | 250 | 950 | 858 | +92 | 1060 |
| 7. |  | FC Baník Ostrava | 780 | 269 | 227 | 284 | 1003 | 988 | +15 | 1020 |
| 8. |  | FK Teplice | 715 | 263 | 212 | 240 | 894 | 844 | +50 | 1001 |
| 9. |  | FC Zbrojovka Brno | 720 | 242 | 186 | 292 | 840 | 948 | -108 | 902 |
| 10. |  | FK Mladá Boleslav | 479 | 201 | 126 | 152 | 725 | 604 | +121 | 729 |
| 11. |  | 1.FK Příbram | 629 | 183 | 160 | 286 | 665 | 912 | -247 | 709 |
| 12. |  | 1.FC Slovácko | 539 | 172 | 147 | 220 | 598 | 678 | -80 | 663 |
| 13. |  | SK Dynamo České Budějovice | 564 | 162 | 156 | 246 | 590 | 836 | -246 | 631 |
| 14. |  | Bohemians Praha 1905 | 539 | 145 | 155 | 239 | 521 | 744 | -223 | 582 |
| 15. |  | FK Viktoria Žižkov | 420 | 144 | 106 | 170 | 478 | 539 | -61 | 526 |
| 16. |  | FC Fastav Zlín | 448 | 130 | 120 | 198 | 430 | 608 | -178 | 500 |
| 17. |  | FC Hradec Králové | 420 | 105 | 113 | 202 | 374 | 601 | -227 | 419 |
| 18. |  | FK Drnovice | 300 | 114 | 67 | 119 | 392 | 398 | -6 | 396 |
| 19. |  | Slezský FC Opava | 299 | 79 | 76 | 144 | 318 | 452 | -134 | 313 |
| 20. |  | FK Dukla Praha | 275 | 77 | 76 | 122 | 325 | 420 | -95 | 306 |
| 21. |  | FK Chmel Blšany | 240 | 67 | 63 | 110 | 255 | 350 | -95 | 264 |
| 22. |  | FC Vysočina Jihlava | 210 | 55 | 61 | 94 | 221 | 315 | -94 | 226 |
| 23. |  | MFK Karviná | 119 | 30 | 29 | 60 | 133 | 177 | -44 | 119 |
| 24. |  | SK Kladno | 120 | 28 | 30 | 62 | 99 | 173 | -74 | 114 |
| 25. |  | FC Union Cheb | 90 | 29 | 26 | 35 | 95 | 121 | -26 | 100 |
| 26. |  | FK SIAD Most | 90 | 19 | 30 | 41 | 96 | 140 | -44 | 87 |
| 27. |  | FK Bohemians Praha | 60 | 14 | 8 | 38 | 60 | 111 | -51 | 50 |
| 28. |  | FC Karviná | 60 | 12 | 12 | 36 | 53 | 105 | -52 | 48 |
| 29. |  | 1.SC Znojmo FK | 30 | 6 | 9 | 15 | 32 | 49 | -17 | 27 |
| 30. |  | FK Ústí nad Labem | 30 | 4 | 7 | 19 | 22 | 67 | -45 | 19 |
| 31. |  | FC JOKO Slovácká Slavia Uherské Hradiště | 30 | 3 | 8 | 19 | 19 | 65 | -46 | 17 |
| 32. |  | MFK Vítkovice | 30 | 3 | 7 | 20 | 22 | 64 | -42 | 13 |
| 33. |  | FK ŠVARC Benešov | 30 | 3 | 3 | 24 | 23 | 78 | -55 | 12 |
| 34. |  | AFK Atl. Lázně Bohdaneč | 30 | 2 | 5 | 23 | 18 | 61 | -43 | 11 |
