| 1. |  | AC Sparta Praha | 785 | 490 | 165 | 130 | 1452 | 617 | +835 | 1617 |
| 2. |  | SK Slavia Praha | 785 | 403 | 209 | 173 | 1273 | 745 | +528 | 1402 |
| 3. |  | FC Slovan Liberec | 785 | 342 | 221 | 222 | 1050 | 834 | +216 | 1236 |
| 4. |  | FK Jablonec | 755 | 297 | 212 | 246 | 1020 | 867 | +153 | 1103 |
| 5. |  | FC Viktoria Plzeň | 665 | 308 | 162 | 195 | 973 | 747 | +226 | 1074 |
| 6. |  | SK Sigma Olomouc | 722 | 282 | 196 | 244 | 919 | 829 | +90 | 1028 |
| 7. |  | FC Baník Ostrava | 756 | 258 | 222 | 276 | 967 | 961 | +6 | 982 |
| 8. |  | FK Teplice | 692 | 258 | 203 | 231 | 875 | 809 | +66 | 977 |
| 9. |  | FC Zbrojovka Brno | 720 | 242 | 186 | 292 | 840 | 948 | -108 | 902 |
| 10. |  | 1.FK Příbram | 605 | 180 | 155 | 270 | 650 | 866 | -216 | 695 |
| 11. |  | FK Mladá Boleslav | 455 | 190 | 122 | 143 | 683 | 567 | +116 | 692 |
| 12. |  | 1.FC Slovácko | 515 | 162 | 140 | 213 | 568 | 651 | -83 | 626 |
| 13. |  | SK Dynamo České Budějovice | 540 | 151 | 153 | 236 | 551 | 798 | -247 | 595 |
| 14. |  | Bohemians Praha 1905 | 515 | 138 | 149 | 228 | 496 | 707 | -211 | 555 |
| 15. |  | FK Viktoria Žižkov | 420 | 144 | 106 | 170 | 478 | 539 | -61 | 526 |
| 16. |  | FC Fastav Zlín | 424 | 124 | 116 | 184 | 408 | 568 | -160 | 478 |
| 17. |  | FC Hradec Králové | 420 | 105 | 113 | 202 | 374 | 601 | -227 | 419 |
| 18. |  | FK Drnovice | 300 | 114 | 67 | 119 | 392 | 398 | -6 | 396 |
| 19. |  | FK Dukla Praha | 275 | 77 | 76 | 122 | 325 | 420 | -95 | 306 |
| 20. |  | Slezský FC Opava | 275 | 75 | 71 | 129 | 307 | 411 | -104 | 296 |
| 21. |  | FK Chmel Blšany | 240 | 67 | 63 | 110 | 255 | 350 | -95 | 264 |
| 22. |  | FC Vysočina Jihlava | 210 | 55 | 61 | 94 | 221 | 315 | -94 | 226 |
| 23. |  | SK Kladno | 120 | 28 | 30 | 62 | 99 | 173 | -74 | 114 |
| 24. |  | FC Union Cheb | 90 | 29 | 26 | 35 | 95 | 121 | -26 | 100 |
| 25. |  | MFK Karviná | 95 | 25 | 21 | 49 | 113 | 147 | -34 | 96 |
| 26. |  | FK SIAD Most | 90 | 19 | 30 | 41 | 96 | 140 | -44 | 87 |
| 27. |  | FK Bohemians Praha | 60 | 14 | 8 | 38 | 60 | 111 | -51 | 50 |
| 28. |  | FC Karviná | 60 | 12 | 12 | 36 | 53 | 105 | -52 | 48 |
| 29. |  | 1.SC Znojmo FK | 30 | 6 | 9 | 15 | 32 | 49 | -17 | 27 |
| 30. |  | FK Ústí nad Labem | 30 | 4 | 7 | 19 | 22 | 67 | -45 | 19 |
| 31. |  | FC JOKO Slovácká Slavia Uherské Hradiště | 30 | 3 | 8 | 19 | 19 | 65 | -46 | 17 |
| 32. |  | MFK Vítkovice | 30 | 3 | 7 | 20 | 22 | 64 | -42 | 13 |
| 33. |  | FK ŠVARC Benešov | 30 | 3 | 3 | 24 | 23 | 78 | -55 | 12 |
| 34. |  | AFK Atl. Lázně Bohdaneč | 30 | 2 | 5 | 23 | 18 | 61 | -43 | 11 |
